SMTL ID : 6z8k.1

La Crosse virus polymerase at elongation mimicking stage

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x G- C- U- A: La Crosse virus 5' vRNA (9-16)(Non-covalent)

G-C-U-A.1: 4 residues within 4Å: Chain B: A.6, G.7, U.8 Chain E: N.402 Protein-ligand interaction information (PLIP) not available

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 7 residues within 4Å: Chain E: C.2086, E.2087, G.2088, H.2191, I.2195, D.2200, H.2204 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:C.2086, E:H.2191, E:D.2200, E:H.2204

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 4 residues within 4Å: Chain E: A.1081, D.1082, D.1210, E.1259 2 PLIP interactions: 2 interactions with chain E Metal complexes: E:D.1210, E:E.1259

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Arragain, B. et al., Pre-initiation and elongation structures of full-length La Crosse virus polymerase reveal functionally important conformational changes. Nat Commun (2020)

Release Date

2020-07-29

Peptides

RNA-directed RNA polymerase L: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

E
A

RNA-directed RNA polymerase L

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