SMTL ID : 6zbv.1

Inward-open structure of human glycine transporter 1 in complex with a benzoylisoindoline inhibitor and sybody Sb_GlyT1#7

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.40 Å

Oligo State

hetero-1-1-mer

Ligands

1 x QET: [5-fluoranyl-6-(oxan-4-yloxy)-1,3-dihydroisoindol-2-yl]-[5-methylsulfonyl-2-[2,2,3,3,3-pentakis(fluoranyl)propoxy]phenyl]methanone(Non-covalent)

QET.1: 27 residues within 4Å: Chain A: Y.26, A.27, V.28, G.29, L.30, G.31, N.32, F.64, L.68, Y.106, Y.263, S.264, L.265, G.266, W.269, G.271, L.272, M.275, A.276, N.279, D.288, I.292, N.296, T.365, C.368, L.369, T.372 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:Y.26, A:Y.26, A:W.269, A:L.272 Hydrogen bonds: A:T.365 Halogen bonds: A:T.365, A:C.368, A:T.372

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shahsavar, A. et al., Structural insights into the inhibition of glycine reuptake. Nature (2021)

Release Date

2021-03-17

Peptides

Sodium- and chloride-dependent glycine transporter 1,Sodium- and chloride-dependent glycine transporter 1: A
Sybody Sb_GlyT1#7: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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Sodium- and chloride-dependent glycine transporter 1,Sodium- and chloride-dependent glycine transporter 1

Sybody Sb_GlyT1#7

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