SMTL ID : 6zck.1

Coxsackievirus B4 in complex with capsid binder compound 48

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x QFW: 4-[(6-propoxynaphthalen-2-yl)sulfonylamino]benzoic acid(Non-covalent)

QFW.1: 10 residues within 4Å: Chain A: C.63, Y.66, K.68, V.90, R.227, Y.229 Chain C: Q.233, D.234, T.235, F.236 6 PLIP interactions: 3 interactions with chain A, 3 interactions with chain C Hydrogen bonds: A:Y.229, C:Q.233 Salt bridges: A:R.227 pi-Stacking: A:Y.66, C:F.236 Hydrophobic interactions: C:F.236

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Flatt, J.W. et al., Identification of a conserved virion-stabilizing network inside the interprotomer pocket of enteroviruses. Commun Biol (2021)

Release Date

2021-03-17

Peptides

Capsid protein VP1: A
Capsid protein VP2: B
Capsid protein VP3: C
Capsid protein VP4: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Capsid protein VP1

Capsid protein VP2

Capsid protein VP3

Capsid protein VP4

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