SMTL ID : 6zhh.2 (7 other biounits)

Ca2+-ATPase from Listeria Monocytogenes with G4 insertion.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x BEF: BERYLLIUM TRIFLUORIDE ION(Covalent)

BEF.1: 11 residues within 4Å: Chain A: T.170, G.171, D.339, K.340, T.341, T.554, G.555, K.609, D.628, N.631 Ligands: MG.2 No protein-ligand interaction detected (PLIP)

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain A: D.339, T.341, D.628, D.632 Ligands: BEF.1 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.339, A:T.341, A:D.628, H2O.1, H2O.1

7 x PCW: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE(Non-covalent)

PCW.3: 13 residues within 4Å: Chain A: L.830, F.833, V.834, Y.836, G.837, R.845, A.852, S.853, F.854, G.855, L.856, W.859, A.863 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.830, A:F.833, A:F.833, A:F.833, A:V.834, A:L.856, A:W.859, A:W.859, A:A.863 Hydrogen bonds: A:L.856 Salt bridges: A:R.845 PCW.4: 3 residues within 4Å: Chain A: D.50, L.52, E.106 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:E.106 PCW.5: 3 residues within 4Å: Chain A: L.268, N.272, S.273 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.268 PCW.6: 8 residues within 4Å: Chain A: A.261, V.262, G.265, R.266, L.269, G.270, V.705 Ligands: PCW.7 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:A.261, A:V.262, A:R.266, A:L.269, A:L.269 PCW.7: 15 residues within 4Å: Chain A: I.698, L.701, F.702, V.705, L.706, W.708, I.763, V.767, I.774, I.775, Y.778, M.781, Q.782 Ligands: PCW.6, PCW.8 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.698, A:L.701, A:F.702, A:F.702, A:V.705, A:I.763, A:V.767, A:I.774 PCW.8: 9 residues within 4Å: Chain A: S.764, V.767, L.768, I.771, I.775, I.779, M.872, I.876 Ligands: PCW.7 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.767, A:L.768, A:I.771, A:I.771, A:I.876 PCW.9: 2 residues within 4Å: Chain A: K.882, F.883 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.883, A:F.883 Salt bridges: A:K.882

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hansen, S.B. et al., The Crystal Structure of the Ca 2+ -ATPase 1 from Listeria monocytogenes reveals a Pump Primed for Dephosphorylation. J.Mol.Biol. (2021)

Release Date

2021-05-19

Peptides

Calcium-transporting ATPase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Calcium-transporting ATPase

Related Entries With Identical Sequence