SMTL ID : 6zly.1

Crystal structure of the complex between PPARgamma LBD and the ligand NV1362 (7a)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.79 Å

Oligo State

homo-dimer

Ligands

1 x QMH: (2~{S})-2-[(4-hexoxyphenyl)carbonylamino]-3-methyl-butanoic acid(Non-covalent)

QMH.1: 16 residues within 4Å: Chain A: F.105, C.108, Q.109, R.111, S.112, A.115, I.119, H.146, I.149, Y.150, M.152, L.153, H.272, L.276, L.292, Y.296 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:F.105, A:Q.109, A:A.115, A:I.119, A:I.149, A:Y.150, A:L.153, A:L.292 Hydrogen bonds: A:S.112, A:S.112, A:Y.150, A:Y.296 Salt bridges: A:H.146, A:H.272

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Peiretti, F. et al., A Novel N-Substituted Valine Derivative with Unique Peroxisome Proliferator-Activated Receptor gamma Binding Properties and Biological Activities. J.Med.Chem. (2020)

Release Date

2020-11-25

Peptides

Peroxisome proliferator-activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma