SMTL ID : 6zp5.1

SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up closed conformation)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
homo-trimer
Ligands
16 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
4 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
6 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose
18 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
2 x MAN: alpha-D-mannopyranose(Non-functional Binders)
3 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Melero, R. et al., Continuous flexibility analysis of SARS-CoV-2 spike prefusion structures. Iucrj (2020)
Release Date
2020-07-29
Peptides
Spike glycoprotein: ABC
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C

Spike glycoprotein

Related Entries With Identical Sequence

6vsb.1 | 6xey.1 | 6zow.1 | 6zp7.1 | 6zxn.1 | 7a29.1 | 7b18.1 | 7kkk.1 | 7kkl.1 | 7kms.1 | 7kmz.1 | 7knb.1 | 7kne.1 | 7knh.1 | 7kni.1 | 7ks9.1 | 7ksg.1 | 7l2d.1 | 7l2e.1 | 7l2f.1 | 7l56.1 | 7l57.1 | 7l58.1 | 7ljr.1 | 7ls9.1 | 7lss.1 | 7mw2.1 | 7mw3.1 | 7mw4.1 | 7mw5.1  more...