- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.24 Å
- Oligo State
- homo-24-mer
- Ligands
- 24 x VIV: (2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL(Non-covalent)
- 24 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 4 residues within 4Å:- Chain A: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.7: 4 residues within 4Å:- Chain B: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.12: 4 residues within 4Å:- Chain C: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.17: 4 residues within 4Å:- Chain D: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.22: 4 residues within 4Å:- Chain E: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.27: 4 residues within 4Å:- Chain F: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.32: 4 residues within 4Å:- Chain G: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.37: 4 residues within 4Å:- Chain H: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.42: 4 residues within 4Å:- Chain I: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.47: 4 residues within 4Å:- Chain J: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.52: 4 residues within 4Å:- Chain K: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.57: 4 residues within 4Å:- Chain L: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.62: 4 residues within 4Å:- Chain M: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.67: 4 residues within 4Å:- Chain N: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.72: 4 residues within 4Å:- Chain O: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.77: 4 residues within 4Å:- Chain P: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.82: 4 residues within 4Å:- Chain Q: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.87: 4 residues within 4Å:- Chain R: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.92: 4 residues within 4Å:- Chain S: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.97: 4 residues within 4Å:- Chain T: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.102: 4 residues within 4Å:- Chain U: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.107: 4 residues within 4Å:- Chain V: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.112: 4 residues within 4Å:- Chain W: K.143, R.145, K.170, R.174
Ligand excluded by PLIPSO4.117: 4 residues within 4Å:- Chain X: K.143, R.145, K.170, R.174
Ligand excluded by PLIP- 48 x CL: CHLORIDE ION(Non-functional Binders)
CL.3: 4 residues within 4Å:- Chain A: H.176, H.178, H.189
- Chain U: V.154
Ligand excluded by PLIPCL.4: 1 residues within 4Å:- Chain A: S.37
Ligand excluded by PLIPCL.8: 4 residues within 4Å:- Chain B: H.176, H.178, H.189
- Chain X: V.154
Ligand excluded by PLIPCL.9: 1 residues within 4Å:- Chain B: S.37
Ligand excluded by PLIPCL.13: 4 residues within 4Å:- Chain C: H.176, H.178, H.189
- Chain W: V.154
Ligand excluded by PLIPCL.14: 1 residues within 4Å:- Chain C: S.37
Ligand excluded by PLIPCL.18: 4 residues within 4Å:- Chain D: H.176, H.178, H.189
- Chain V: V.154
Ligand excluded by PLIPCL.19: 1 residues within 4Å:- Chain D: S.37
Ligand excluded by PLIPCL.23: 4 residues within 4Å:- Chain E: H.176, H.178, H.189
- Chain R: V.154
Ligand excluded by PLIPCL.24: 1 residues within 4Å:- Chain E: S.37
Ligand excluded by PLIPCL.28: 4 residues within 4Å:- Chain F: H.176, H.178, H.189
- Chain S: V.154
Ligand excluded by PLIPCL.29: 1 residues within 4Å:- Chain F: S.37
Ligand excluded by PLIPCL.33: 4 residues within 4Å:- Chain G: H.176, H.178, H.189
- Chain T: V.154
Ligand excluded by PLIPCL.34: 1 residues within 4Å:- Chain G: S.37
Ligand excluded by PLIPCL.38: 4 residues within 4Å:- Chain H: H.176, H.178, H.189
- Chain Q: V.154
Ligand excluded by PLIPCL.39: 1 residues within 4Å:- Chain H: S.37
Ligand excluded by PLIPCL.43: 4 residues within 4Å:- Chain I: H.176, H.178, H.189
- Chain O: V.154
Ligand excluded by PLIPCL.44: 1 residues within 4Å:- Chain I: S.37
Ligand excluded by PLIPCL.48: 4 residues within 4Å:- Chain J: H.176, H.178, H.189
- Chain N: V.154
Ligand excluded by PLIPCL.49: 1 residues within 4Å:- Chain J: S.37
Ligand excluded by PLIPCL.53: 4 residues within 4Å:- Chain K: H.176, H.178, H.189
- Chain M: V.154
Ligand excluded by PLIPCL.54: 1 residues within 4Å:- Chain K: S.37
Ligand excluded by PLIPCL.58: 4 residues within 4Å:- Chain L: H.176, H.178, H.189
- Chain P: V.154
Ligand excluded by PLIPCL.59: 1 residues within 4Å:- Chain L: S.37
Ligand excluded by PLIPCL.63: 4 residues within 4Å:- Chain I: V.154
- Chain M: H.176, H.178, H.189
Ligand excluded by PLIPCL.64: 1 residues within 4Å:- Chain M: S.37
Ligand excluded by PLIPCL.68: 4 residues within 4Å:- Chain L: V.154
- Chain N: H.176, H.178, H.189
Ligand excluded by PLIPCL.69: 1 residues within 4Å:- Chain N: S.37
Ligand excluded by PLIPCL.73: 4 residues within 4Å:- Chain K: V.154
- Chain O: H.176, H.178, H.189
Ligand excluded by PLIPCL.74: 1 residues within 4Å:- Chain O: S.37
Ligand excluded by PLIPCL.78: 4 residues within 4Å:- Chain J: V.154
- Chain P: H.176, H.178, H.189
Ligand excluded by PLIPCL.79: 1 residues within 4Å:- Chain P: S.37
Ligand excluded by PLIPCL.83: 4 residues within 4Å:- Chain F: V.154
- Chain Q: H.176, H.178, H.189
Ligand excluded by PLIPCL.84: 1 residues within 4Å:- Chain Q: S.37
Ligand excluded by PLIPCL.88: 4 residues within 4Å:- Chain G: V.154
- Chain R: H.176, H.178, H.189
Ligand excluded by PLIPCL.89: 1 residues within 4Å:- Chain R: S.37
Ligand excluded by PLIPCL.93: 4 residues within 4Å:- Chain H: V.154
- Chain S: H.176, H.178, H.189
Ligand excluded by PLIPCL.94: 1 residues within 4Å:- Chain S: S.37
Ligand excluded by PLIPCL.98: 4 residues within 4Å:- Chain E: V.154
- Chain T: H.176, H.178, H.189
Ligand excluded by PLIPCL.99: 1 residues within 4Å:- Chain T: S.37
Ligand excluded by PLIPCL.103: 4 residues within 4Å:- Chain C: V.154
- Chain U: H.176, H.178, H.189
Ligand excluded by PLIPCL.104: 1 residues within 4Å:- Chain U: S.37
Ligand excluded by PLIPCL.108: 4 residues within 4Å:- Chain B: V.154
- Chain V: H.176, H.178, H.189
Ligand excluded by PLIPCL.109: 1 residues within 4Å:- Chain V: S.37
Ligand excluded by PLIPCL.113: 4 residues within 4Å:- Chain A: V.154
- Chain W: H.176, H.178, H.189
Ligand excluded by PLIPCL.114: 1 residues within 4Å:- Chain W: S.37
Ligand excluded by PLIPCL.118: 4 residues within 4Å:- Chain D: V.154
- Chain X: H.176, H.178, H.189
Ligand excluded by PLIPCL.119: 1 residues within 4Å:- Chain X: S.37
Ligand excluded by PLIP- 24 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
TRS.5: 5 residues within 4Å:- Chain A: W.20
- Chain F: W.20
- Chain L: W.20
- Ligands: TRS.30, TRS.60
Ligand excluded by PLIPTRS.10: 5 residues within 4Å:- Chain B: W.20
- Chain H: W.20
- Chain I: W.20
- Ligands: TRS.40, TRS.45
Ligand excluded by PLIPTRS.15: 5 residues within 4Å:- Chain C: W.20
- Chain G: W.20
- Chain K: W.20
- Ligands: TRS.35, TRS.55
Ligand excluded by PLIPTRS.20: 5 residues within 4Å:- Chain D: W.20
- Chain E: W.20
- Chain J: W.20
- Ligands: TRS.25, TRS.50
Ligand excluded by PLIPTRS.25: 5 residues within 4Å:- Chain D: W.20
- Chain E: W.20
- Chain J: W.20
- Ligands: TRS.20, TRS.50
Ligand excluded by PLIPTRS.30: 5 residues within 4Å:- Chain A: W.20
- Chain F: W.20
- Chain L: W.20
- Ligands: TRS.5, TRS.60
Ligand excluded by PLIPTRS.35: 5 residues within 4Å:- Chain C: W.20
- Chain G: W.20
- Chain K: W.20
- Ligands: TRS.15, TRS.55
Ligand excluded by PLIPTRS.40: 5 residues within 4Å:- Chain B: W.20
- Chain H: W.20
- Chain I: W.20
- Ligands: TRS.10, TRS.45
Ligand excluded by PLIPTRS.45: 5 residues within 4Å:- Chain B: W.20
- Chain H: W.20
- Chain I: W.20
- Ligands: TRS.10, TRS.40
Ligand excluded by PLIPTRS.50: 5 residues within 4Å:- Chain D: W.20
- Chain E: W.20
- Chain J: W.20
- Ligands: TRS.20, TRS.25
Ligand excluded by PLIPTRS.55: 5 residues within 4Å:- Chain C: W.20
- Chain G: W.20
- Chain K: W.20
- Ligands: TRS.15, TRS.35
Ligand excluded by PLIPTRS.60: 5 residues within 4Å:- Chain A: W.20
- Chain F: W.20
- Chain L: W.20
- Ligands: TRS.5, TRS.30
Ligand excluded by PLIPTRS.65: 5 residues within 4Å:- Chain M: W.20
- Chain R: W.20
- Chain X: W.20
- Ligands: TRS.90, TRS.120
Ligand excluded by PLIPTRS.70: 5 residues within 4Å:- Chain N: W.20
- Chain T: W.20
- Chain U: W.20
- Ligands: TRS.100, TRS.105
Ligand excluded by PLIPTRS.75: 5 residues within 4Å:- Chain O: W.20
- Chain S: W.20
- Chain W: W.20
- Ligands: TRS.95, TRS.115
Ligand excluded by PLIPTRS.80: 5 residues within 4Å:- Chain P: W.20
- Chain Q: W.20
- Chain V: W.20
- Ligands: TRS.85, TRS.110
Ligand excluded by PLIPTRS.85: 5 residues within 4Å:- Chain P: W.20
- Chain Q: W.20
- Chain V: W.20
- Ligands: TRS.80, TRS.110
Ligand excluded by PLIPTRS.90: 5 residues within 4Å:- Chain M: W.20
- Chain R: W.20
- Chain X: W.20
- Ligands: TRS.65, TRS.120
Ligand excluded by PLIPTRS.95: 5 residues within 4Å:- Chain O: W.20
- Chain S: W.20
- Chain W: W.20
- Ligands: TRS.75, TRS.115
Ligand excluded by PLIPTRS.100: 5 residues within 4Å:- Chain N: W.20
- Chain T: W.20
- Chain U: W.20
- Ligands: TRS.70, TRS.105
Ligand excluded by PLIPTRS.105: 5 residues within 4Å:- Chain N: W.20
- Chain T: W.20
- Chain U: W.20
- Ligands: TRS.70, TRS.100
Ligand excluded by PLIPTRS.110: 5 residues within 4Å:- Chain P: W.20
- Chain Q: W.20
- Chain V: W.20
- Ligands: TRS.80, TRS.85
Ligand excluded by PLIPTRS.115: 5 residues within 4Å:- Chain O: W.20
- Chain S: W.20
- Chain W: W.20
- Ligands: TRS.75, TRS.95
Ligand excluded by PLIPTRS.120: 5 residues within 4Å:- Chain M: W.20
- Chain R: W.20
- Chain X: W.20
- Ligands: TRS.65, TRS.90
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Aeschimann, W. et al., Engineering of a functional gamma-tocopherol transfer protein. Redox Biol (2020)
- Release Date
- 2020-12-02
- Peptides
- Alpha-tocopherol transfer protein: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.24 Å
- Oligo State
- homo-24-mer
- Ligands
- 24 x VIV: (2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL(Non-covalent)
- 24 x SO4: SULFATE ION(Non-functional Binders)
- 48 x CL: CHLORIDE ION(Non-functional Binders)
- 24 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Aeschimann, W. et al., Engineering of a functional gamma-tocopherol transfer protein. Redox Biol (2020)
- Release Date
- 2020-12-02
- Peptides
- Alpha-tocopherol transfer protein: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A