SMTL ID : 6zpu.1

Crystal structure of Angiotensin-1 converting enzyme C-domain with inserted symmetry molecule C-terminus.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 5 residues within 4Å: Chain A: N.36, T.38, E.40, T.41, R.312 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- BMA- MAN- NAG- MAN- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUC.2: 10 residues within 4Å: Chain A: S.9, V.12, N.73, T.75, I.76, I.79, D.360, L.361, P.362, K.531 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.360, A:D.360 Hydrophobic interactions: A:V.12

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 7 residues within 4Å: Chain A: Q.245, H.317, F.421, K.475, H.477, Y.484, Y.487 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:Y.487 Hydrogen bonds: A:Q.245, A:Y.484, A:Y.484 Water bridges: A:K.475, A:K.475 Salt bridges: A:H.317, A:K.475, A:H.477

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 8 residues within 4Å: Chain A: Y.33, I.37, T.38, T.39, S.42, L.104, D.105, T.108 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.108 EDO.5: 4 residues within 4Å: Chain A: R.277, R.278, K.281, W.300 No protein-ligand interaction detected (PLIP) EDO.6: 5 residues within 4Å: Chain A: Q.272, W.274, R.278, K.281, E.282 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.278

1 x ZN: ZINC ION(Non-covalent)

ZN.7: 4 residues within 4Å: Chain A: H.347, H.351, E.375, Y.487 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.347, A:H.351, A:E.375

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.8: 5 residues within 4Å: Chain A: Y.188, P.371, P.483, I.485, R.486 Ligand excluded by PLIP CL.9: 6 residues within 4Å: Chain A: W.146, R.150, W.449, W.450, R.453, D.471 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cozier, G.E. et al., Angiotensin-converting enzyme open for business: structural insights into the subdomain dynamics. Febs J. (2021)

Release Date

2020-10-28

Peptides

Angiotensin-converting enzyme: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Angiotensin-converting enzyme

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