SMTL ID : 6zw0.1

Connectase MJ0548 from Methanocaldococcus jannaschii in complex with an MtrA-derived peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.05 Å

Oligo State

hetero-2-2-mer

Ligands

2 x QRE: 2-[3,6-bis(oxidanyl)-9~{H}-xanthen-9-yl]-5-[(6-oxidanyl-6-oxidanylidene-hexyl)carbamothioylamino]benzoic acid(Non-covalent)

QRE.1: 9 residues within 4Å: Chain A: R.81, L.83, R.89, Y.198, R.199, L.202 Chain B: M.213, N.217 Chain C: L.14 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.83, A:Y.198, A:L.202 Hydrogen bonds: A:R.89, A:R.89, A:Y.198, A:R.199 Salt bridges: A:R.81 QRE.2: 8 residues within 4Å: Chain A: M.213 Chain B: R.81, L.83, R.89, Y.198, R.199, L.202 Chain D: L.14 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:L.83, B:Y.198, B:L.202 Hydrogen bonds: B:R.89, B:R.89, B:Y.198, B:R.199, B:R.199 Salt bridges: B:R.81

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fuchs, A.C.D. et al., Archaeal Connectase is a specific and efficient protein ligase related to proteasome beta subunits. Proc.Natl.Acad.Sci.USA (2021)

Release Date

2021-06-09

Peptides

Connectase MJ0548: AB
Tetrahydromethanopterin S-methyltransferase subunit A: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Connectase MJ0548

Tetrahydromethanopterin S-methyltransferase subunit A