SMTL ID : 6zyp.2 (1 other biounit)

Structure of NDM-1 with 2-Mercaptomethyl-thiazolidine L-anti-1b

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.94, H.96, H.163, T.164 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.94, A:H.96, A:H.163, H2O.1 ZN.2: 5 residues within 4Å: Chain A: H.94, D.98, C.182, S.223, H.224 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.98, A:C.182, A:H.224, H2O.1, H2O.7

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rossi, M.A. et al., 2-Mercaptomethyl-thiazolidines use conserved aromatic-S interactions to achieve broad-range inhibition of metallo-beta-lactamases. Chem Sci (2021)

Release Date

2021-01-20

Peptides

Metallo-beta-lactamase type 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Metallo-beta-lactamase type 2

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