- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.93 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 8 x AAE: ACETOACETIC ACID(Non-functional Binders)
AAE.2: 8 residues within 4Å:- Chain A: Q.95, S.143, N.145, K.153, Y.156, Y.188, Q.197
- Ligands: NAD.1
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:Y.156, A:Y.188
- Hydrogen bonds: A:Q.95, A:Q.197
- Salt bridges: A:K.153
AAE.3: 4 residues within 4Å:- Chain A: F.94, K.110, V.114
- Ligands: NAD.1
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:F.94, A:K.110
AAE.5: 8 residues within 4Å:- Chain B: Q.95, S.143, N.145, K.153, Y.156, Y.188, Q.197
- Ligands: NAD.4
5 PLIP interactions:5 interactions with chain B- Hydrophobic interactions: B:Y.156, B:Y.188
- Hydrogen bonds: B:Q.95, B:Q.197
- Salt bridges: B:K.153
AAE.6: 4 residues within 4Å:- Chain B: F.94, K.110, V.114
- Ligands: NAD.4
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:F.94, B:K.110
AAE.8: 8 residues within 4Å:- Chain C: Q.95, S.143, N.145, K.153, Y.156, Y.188, Q.197
- Ligands: NAD.7
5 PLIP interactions:5 interactions with chain C- Hydrophobic interactions: C:Y.156, C:Y.188
- Hydrogen bonds: C:Q.95, C:Q.197
- Salt bridges: C:K.153
AAE.9: 4 residues within 4Å:- Chain C: F.94, K.110, V.114
- Ligands: NAD.7
2 PLIP interactions:2 interactions with chain C- Hydrophobic interactions: C:F.94, C:K.110
AAE.11: 8 residues within 4Å:- Chain D: Q.95, S.143, N.145, K.153, Y.156, Y.188, Q.197
- Ligands: NAD.10
5 PLIP interactions:5 interactions with chain D- Hydrophobic interactions: D:Y.156, D:Y.188
- Hydrogen bonds: D:Q.95, D:Q.197
- Salt bridges: D:K.153
AAE.12: 4 residues within 4Å:- Chain D: F.94, K.110, V.114
- Ligands: NAD.10
2 PLIP interactions:2 interactions with chain D- Hydrophobic interactions: D:F.94, D:K.110
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Machado, T.F.G. et al., Dissecting the Mechanism of ( R )-3-Hydroxybutyrate Dehydrogenase by Kinetic Isotope Effects, Protein Crystallography, and Computational Chemistry. Acs Catalysis (2020)
- Release Date
- 2020-10-07
- Peptides
- 3-hydroxybutyrate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.93 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 8 x AAE: ACETOACETIC ACID(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Machado, T.F.G. et al., Dissecting the Mechanism of ( R )-3-Hydroxybutyrate Dehydrogenase by Kinetic Isotope Effects, Protein Crystallography, and Computational Chemistry. Acs Catalysis (2020)
- Release Date
- 2020-10-07
- Peptides
- 3-hydroxybutyrate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A