- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.55 Å
- Oligo State
- homo-tetramer
- Ligands
- 16 x FUL: beta-L-fucopyranose(Non-covalent)
- 8 x FUC: alpha-L-fucopyranose(Non-covalent)
FUC.2: 10 residues within 4Å:- Chain A: G.71, V.72, V.73, V.91, G.93, T.94, D.95, W.99, W.114
- Ligands: FUL.1
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:W.99
- Hydrogen bonds: A:V.72, A:V.72, A:T.94, A:D.95
- Water bridges: A:T.94, A:D.95
FUC.4: 9 residues within 4Å:- Chain A: G.119, G.120, I.121, V.139, G.141, S.142, W.147, W.162
- Ligands: FUL.3
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:I.121, A:W.147
- Hydrogen bonds: A:G.120, A:S.142, A:S.142
- Water bridges: A:D.143
FUC.8: 10 residues within 4Å:- Chain B: G.71, V.72, V.73, V.91, G.93, T.94, D.95, W.99, W.114
- Ligands: FUL.7
7 PLIP interactions:7 interactions with chain B- Hydrophobic interactions: B:W.99
- Hydrogen bonds: B:V.72, B:V.72, B:T.94, B:D.95
- Water bridges: B:T.94, B:D.95
FUC.10: 9 residues within 4Å:- Chain B: G.119, G.120, I.121, V.139, G.141, S.142, W.147, W.162
- Ligands: FUL.9
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:I.121, B:W.147
- Hydrogen bonds: B:G.120, B:S.142, B:S.142
- Water bridges: B:D.143
FUC.14: 10 residues within 4Å:- Chain C: G.71, V.72, V.73, V.91, G.93, T.94, D.95, W.99, W.114
- Ligands: FUL.13
6 PLIP interactions:6 interactions with chain C- Hydrophobic interactions: C:W.99
- Hydrogen bonds: C:V.72, C:V.72, C:T.94, C:D.95
- Water bridges: C:T.94
FUC.16: 9 residues within 4Å:- Chain C: G.119, G.120, I.121, V.139, G.141, S.142, W.147, W.162
- Ligands: FUL.15
6 PLIP interactions:6 interactions with chain C- Hydrophobic interactions: C:I.121, C:W.147
- Hydrogen bonds: C:G.120, C:S.142, C:S.142
- Water bridges: C:D.143
FUC.20: 10 residues within 4Å:- Chain D: G.71, V.72, V.73, V.91, G.93, T.94, D.95, W.99, W.114
- Ligands: FUL.19
6 PLIP interactions:6 interactions with chain D- Hydrophobic interactions: D:W.99
- Hydrogen bonds: D:V.72, D:V.72, D:T.94, D:D.95
- Water bridges: D:T.94
FUC.22: 9 residues within 4Å:- Chain D: G.119, G.120, I.121, V.139, G.141, S.142, W.147, W.162
- Ligands: FUL.21
6 PLIP interactions:6 interactions with chain D- Hydrophobic interactions: D:I.121, D:W.147
- Hydrogen bonds: D:G.120, D:S.142, D:S.142
- Water bridges: D:D.143
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gajdos, L. et al., Visualization of hydrogen atoms in a perdeuterated lectin-fucose complex reveals key details of protein-carbohydrate interactions. Structure (2021)
- Release Date
- 2021-03-17
- Peptides
- PLL lectin: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.55 Å
- Oligo State
- homo-tetramer
- Ligands
- 16 x FUL: beta-L-fucopyranose(Non-covalent)
- 8 x FUC: alpha-L-fucopyranose(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gajdos, L. et al., Visualization of hydrogen atoms in a perdeuterated lectin-fucose complex reveals key details of protein-carbohydrate interactions. Structure (2021)
- Release Date
- 2021-03-17
- Peptides
- PLL lectin: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A