SMTL ID : 7a29.1

Cryo-EM structure of the SARS-CoV-2 spike protein bound to neutralizing sybodies (Sb23) 2-up conformation

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-3-3-mer
Ligands
8 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
45 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Custodio, T.F. et al., Selection, biophysical and structural analysis of synthetic nanobodies that effectively neutralize SARS-CoV-2. Nat Commun (2020)
Release Date
2020-10-21
Peptides
Spike glycoprotein: ABC
Neutralising sybody (Sb23): DEF
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D
E
E
F
F

Spike glycoprotein

Toggle Identical (AB)

Neutralising sybody (Sb23)

Toggle Identical (DEF)

Related Entries With Identical Sequence

6vsb.1 | 6xey.1 | 6zow.1 | 6zp5.1 | 6zp7.1 | 6zxn.1 | 7a25.1 | 7b18.1 | 7kkk.1 | 7kkl.1 | 7kms.1 | 7kmz.1 | 7knb.1 | 7kne.1 | 7knh.1 | 7kni.1 | 7ks9.1 | 7ksg.1 | 7l2d.1 | 7l2e.1 | 7l2f.1 | 7l56.1 | 7l57.1 | 7l58.1 | 7ljr.1 | 7ls9.1 | 7lss.1 | 7mw2.1 | 7mw3.1 | 7mw4.1  more...