SMTL ID : 7a36.1 (1 other biounit)

Crystal structure of the c-Src SH3 domain mutant V111L-N113S-T114S in 7 M urea

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

8 x URE: UREA(Non-functional Binders)

URE.1: 5 residues within 4Å: Chain A: K.22, E.25, T.44, T.45 Ligands: URE.8 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.25, A:E.25, A:E.25 URE.2: 7 residues within 4Å: Chain A: E.16, T.17, D.18, L.39, T.48, G.49, Y.50 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.17, A:T.17 Water bridges: A:T.48 URE.3: 6 residues within 4Å: Chain A: L.8, S.53, N.54, V.56, A.57 Ligands: URE.7 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.56 Water bridges: A:S.53 URE.4: 4 residues within 4Å: Chain A: H.41, S.42, L.43, G.46 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.41, A:S.42, A:G.46 Water bridges: A:L.43 URE.5: 3 residues within 4Å: Chain A: Y.9, D.10, K.23 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.10, A:D.10 URE.6: 4 residues within 4Å: Chain A: Y.11, E.12, R.14, Y.55 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.12, A:E.12 Water bridges: A:Y.55 URE.7: 7 residues within 4Å: Chain A: F.5, W.38, S.53, V.56, A.57, P.58 Ligands: URE.3 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.56, A:V.56 URE.8: 5 residues within 4Å: Chain A: L.19, S.20, T.45, Q.47 Ligands: URE.1 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.20, A:S.20, A:Q.47 Water bridges: A:T.45, A:T.45

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Camara-Artigas, A. et al., Crystal structure of the c-Src SH3 domain mutant V111L-N113S-T114S in 7 M urea. To be published

Release Date

2021-08-25

Peptides

Proto-oncogene tyrosine-protein kinase Src: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Proto-oncogene tyrosine-protein kinase Src

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