SMTL ID : 7a52.1 (1 other biounit)

Structure of DYRK1A in complex with compound 6

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x QYB: 3-phenyl-1H,4H,5H-pyrazolo[3,4-d]pyrimidin-4-one(Non-covalent)

QYB.1: 10 residues within 4Å: Chain A: I.39, A.60, K.62, V.96, F.112, E.113, M.114, L.115, L.168, D.181 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:A.60, A:K.62, A:F.112, A:F.112, A:L.168, A:D.181 Hydrogen bonds: A:L.115

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 3 residues within 4Å: Chain A: R.199, R.202, E.240 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.199 Water bridges: A:E.240 Salt bridges: A:R.199, A:R.202 PO4.3: 3 residues within 4Å: Chain A: K.138, R.174, S.175 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.175 Water bridges: A:K.138, A:S.175, A:A.176 Salt bridges: A:K.138

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee Walmsley, D. et al., Fragment-Derived Selective Inhibitors of Dual-Specificity Kinases DYRK1A and DYRK1B. J.Med.Chem. (2021)

Release Date

2021-06-30

Peptides

Dual specificity tyrosine-phosphorylation-regulated kinase 1A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dual specificity tyrosine-phosphorylation-regulated kinase 1A

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