SMTL ID : 7a54.2 (1 other biounit)

Two copies of the catalytic domain of NanA sialidase from Streptococcus pneumoniae juxtaposed in the P212121 space group, in complex with DANA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x DAN: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID(Non-covalent)

DAN.1: 19 residues within 4Å: Chain A: R.54, I.55, R.73, D.79, I.123, D.124, D.141, F.143, I.149, F.150, F.272, Y.297, L.305, Q.309, E.354, R.370, Y.402, R.428, Y.459 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:R.73, A:D.79, A:D.124, A:D.124, A:Y.297, A:Q.309, A:Q.309, A:E.354, A:Y.402 Water bridges: A:R.54 Salt bridges: A:R.54, A:R.370, A:R.428

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Assailly, C. et al., Polyvalent Transition-State Analogues of Sialyl Substrates Strongly Inhibit Bacterial Sialidases*. Chemistry (2021)

Release Date

2020-11-18

Peptides

Sialidase A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Sialidase A

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