SMTL ID : 7a8p.1

Structure of human mitochondrial RNA polymerase in complex with IMT inhibitor.

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x R4Q: (3~{R})-1-[(2~{R})-2-[4-(2-chloranyl-4-fluoranyl-phenyl)-2-oxidanylidene-chromen-7-yl]oxypropanoyl]piperidine-3-carboxylic acid(Non-covalent)

R4Q.1: 18 residues within 4Å: Chain A: V.622, P.645, L.688, E.691, A.692, R.695, A.699, L.702, H.725, F.726, N.727, H.728, L.729, S.731, V.733, A.734, L.737, L.738 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.622, A:L.688, A:A.692, A:R.695, A:F.726, A:L.737, A:L.738 Salt bridges: A:H.728 pi-Stacking: A:F.726 Halogen bonds: A:A.734

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bonekamp, N.A. et al., Small-molecule inhibitors of human mitochondrial DNA transcription. Nature (2020)

Release Date

2020-12-30

Peptides

DNA-directed RNA polymerase, mitochondrial: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA-directed RNA polymerase, mitochondrial