SMTL ID : 7aa0.2 (1 other biounit)

Structural comparison of cellular retinoic acid binding protein I and II in the presence and absence of natural and synthetic ligands

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.82 Å

Oligo State

monomer

Ligands

1 x R6B: (~{E})-3-[4-(4,4-dimethyl-1-propan-2-yl-2,3-dihydroquinolin-6-yl)phenyl]prop-2-enoic acid(Non-covalent)

R6B.1: 22 residues within 4Å: Chain A: F.16, L.20, V.25, L.29, I.32, A.33, A.36, A.37, P.40, V.42, T.55, T.57, V.59, R.60, V.77, D.78, G.79, R.112, L.122, M.124, R.133, Y.135 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.29, A:I.32, A:A.33, A:A.37, A:T.55, A:R.60, A:V.77 Hydrogen bonds: A:Y.135 Water bridges: A:T.55, A:T.55, A:T.55, A:T.55 Salt bridges: A:R.133 pi-Stacking: A:F.16

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tomlinson, C.W.E. et al., Structure-functional relationship of cellular retinoic acid-binding proteins I and II interacting with natural and synthetic ligands. Acta Crystallogr D Struct Biol (2021)

Release Date

2021-02-17

Peptides

Cellular retinoic acid-binding protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

Cellular retinoic acid-binding protein 2

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