SMTL ID : 7aar.1

sugar/H+ symporter STP10 in inward open conformation

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.64 Å

Oligo State

monomer

Ligands

2 x 37X: Octyl Glucose Neopentyl Glycol(Non-covalent)

37X.1: 9 residues within 4Å: Chain A: I.105, K.108, H.109, K.112, V.113, F.116, F.221, D.225, R.233 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:I.105, A:V.113, A:F.116, A:F.221, A:F.221 Hydrogen bonds: A:K.108, A:D.225, A:R.233 Salt bridges: A:H.109 37X.3: 15 residues within 4Å: Chain A: L.43, V.149, N.153, P.157, N.173, F.176, Q.177, I.180, T.336, S.339, G.406, P.407, W.410, M.434 Ligands: BGC.2 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.149, A:N.153, A:I.180, A:W.410, A:W.410 Hydrogen bonds: A:N.153, A:N.173, A:Q.177, A:S.339, A:G.406

1 x BGC: beta-D-glucopyranose(Non-covalent)

BGC.2: 10 residues within 4Å: Chain A: L.43, Q.295, Q.296, N.301, M.304, N.332, F.401, G.406, W.410 Ligands: 37X.3 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Q.295, A:Q.295, A:Q.296, A:N.301, A:N.301, A:N.332, A:N.332, A:W.410

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 5 residues within 4Å: Chain A: K.112, Y.159, D.225, T.226, S.229 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bavnhoj, L. et al., Molecular mechanism of sugar transport in plants unveiled by structures of glucose/H + symporter STP10. Nat.Plants (2021)

Release Date

2021-08-18

Peptides

Sugar transport protein 10: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Sugar transport protein 10