- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- monomer
- Ligands
- 8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.1: 1 residues within 4Å:- Chain A: C.54
No protein-ligand interaction detected (PLIP)EDO.5: 7 residues within 4Å:- Chain A: P.199, V.202, N.251, T.252, Q.253, R.278, L.283
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:P.199, A:N.251, A:R.278
EDO.6: 9 residues within 4Å:- Chain A: L.140, A.141, G.143, E.144, A.145, E.325, D.328, F.329
- Ligands: EDO.8
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:G.143, A:E.144, A:A.145, A:E.325, A:D.328, A:F.329
EDO.7: 8 residues within 4Å:- Chain A: P.178, M.293, W.294, F.295, K.301, T.302, N.303, V.304
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:T.302, A:N.303
EDO.8: 8 residues within 4Å:- Chain A: Q.142, G.143, E.144, A.145, A.146, D.328, Y.332
- Ligands: EDO.6
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:G.143, A:A.145, A:A.146, A:D.328
EDO.9: 5 residues within 4Å:- Chain A: P.64, V.65, E.68, N.238, M.239
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:E.68
EDO.10: 1 residues within 4Å:- Chain A: R.361
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:R.361
EDO.11: 5 residues within 4Å:- Chain A: V.65, I.88, P.113, G.119, S.120
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:G.119
- Water bridges: A:S.63, A:G.115, A:S.120
- 3 x ZN: ZINC ION(Non-covalent)
ZN.2: 5 residues within 4Å:- Chain A: H.34, H.36, H.116, D.137
- Ligands: ZN.4
6 PLIP interactions:4 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:H.34, A:H.36, A:H.116, A:D.137, H2O.1, H2O.5
ZN.3: 4 residues within 4Å:- Chain A: H.229, H.255, C.257, C.273
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:H.229, A:H.255, A:C.257, A:C.273
ZN.4: 4 residues within 4Å:- Chain A: D.38, H.39, D.137
- Ligands: ZN.2
5 PLIP interactions:3 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:D.38, A:H.39, A:D.137, H2O.1, H2O.1
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yosaatmadja, Y. et al., Structural and mechanistic insights into the Artemis endonuclease and strategies for its inhibition. Nucleic Acids Res. (2021)
- Release Date
- 2020-10-28
- Peptides
- Protein artemis: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- monomer
- Ligands
- 8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 3 x ZN: ZINC ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yosaatmadja, Y. et al., Structural and mechanistic insights into the Artemis endonuclease and strategies for its inhibition. Nucleic Acids Res. (2021)
- Release Date
- 2020-10-28
- Peptides
- Protein artemis: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A