SMTL ID : 7ag1.1

Crystal structure of E. coli SFP aldolase (YihT) from sulfo-EMP pathway

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-tetramer

Ligands

18 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: D.22, L.64, F.93, K.124, E.159 Ligand excluded by PLIP EDO.2: 6 residues within 4Å: Chain A: Q.67, Y.71, K.109, I.110, N.111, I.115 Ligand excluded by PLIP EDO.3: 6 residues within 4Å: Chain A: M.242, T.243, M.287, K.290, R.291, E.294 Ligand excluded by PLIP EDO.4: 5 residues within 4Å: Chain B: D.22, L.64, F.93, K.124, E.159 Ligand excluded by PLIP EDO.5: 7 residues within 4Å: Chain B: Q.67, Y.71, K.109, I.110, N.111, Q.114, I.115 Ligand excluded by PLIP EDO.6: 4 residues within 4Å: Chain B: Q.68, F.69, C.70, Q.73 Ligand excluded by PLIP EDO.7: 6 residues within 4Å: Chain A: P.275, Q.278 Chain B: P.275, Q.278, Q.279, D.282 Ligand excluded by PLIP EDO.8: 2 residues within 4Å: Chain B: L.139, E.183 Ligand excluded by PLIP EDO.9: 3 residues within 4Å: Chain B: V.162, R.163, P.164 Ligand excluded by PLIP EDO.10: 5 residues within 4Å: Chain C: D.22, L.64, F.93, K.124, E.159 Ligand excluded by PLIP EDO.11: 6 residues within 4Å: Chain C: Q.67, Y.71, K.109, I.110, N.111, I.115 Ligand excluded by PLIP EDO.12: 6 residues within 4Å: Chain C: M.242, T.243, M.287, K.290, R.291, E.294 Ligand excluded by PLIP EDO.13: 5 residues within 4Å: Chain D: D.22, L.64, F.93, K.124, E.159 Ligand excluded by PLIP EDO.14: 7 residues within 4Å: Chain D: Q.67, Y.71, K.109, I.110, N.111, Q.114, I.115 Ligand excluded by PLIP EDO.15: 4 residues within 4Å: Chain D: Q.68, F.69, C.70, Q.73 Ligand excluded by PLIP EDO.16: 6 residues within 4Å: Chain C: P.275, Q.278 Chain D: P.275, Q.278, Q.279, D.282 Ligand excluded by PLIP EDO.17: 2 residues within 4Å: Chain D: L.139, E.183 Ligand excluded by PLIP EDO.18: 3 residues within 4Å: Chain D: V.162, R.163, P.164 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sharma, M. et al., Molecular Basis of Sulfosugar Selectivity in Sulfoglycolysis. Acs Cent.Sci. (2021)

Release Date

2021-04-14

Peptides

Sulfofructosephosphate aldolase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
Z

B
X

C
Z

D
X

Sulfofructosephosphate aldolase