SMTL ID : 7aka.2 (1 other biounit)

Structure of DYRK1A in complex with compound 54

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x RK2: 4-[2-methyl-3-[(2~{R})-2-pyridin-2-yloxypropyl]imidazo[4,5-b]pyridin-5-yl]pyridine-2,6-diamine(Non-covalent)

RK2.1: 17 residues within 4Å: Chain A: I.39, G.40, K.41, F.44, A.60, K.62, E.77, F.112, E.113, M.114, L.115, S.116, E.165, N.166, L.168, V.180, D.181 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:I.39, A:A.60, A:F.112, A:F.112, A:L.168, A:V.180, A:V.180 Hydrogen bonds: A:E.77, A:L.115, A:D.181, A:D.181, A:D.181 Water bridges: A:K.41, A:N.118

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 4 residues within 4Å: Chain A: Y.195, R.199, R.202, E.240 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.202 Salt bridges: A:R.199, A:R.202

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: N.239, E.240, V.241 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Weber, C. et al., Structure-Guided Discovery of Potent and Selective DYRK1A Inhibitors. J.Med.Chem. (2021)

Release Date

2021-05-26

Peptides

Dual specificity tyrosine-phosphorylation-regulated kinase 1A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Dual specificity tyrosine-phosphorylation-regulated kinase 1A

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