SMTL ID : 7alk.1

Structure of Drosophila C2-DSL-EGF1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- BMA- MAN- MAN- FUC: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN-FUC.1: 5 residues within 4Å: Chain A: R.42, I.69, K.86, G.87, N.115 No protein-ligand interaction detected (PLIP)

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 2 residues within 4Å: Chain A: N.76, T.78 No protein-ligand interaction detected (PLIP) NAG.3: 5 residues within 4Å: Chain A: V.132, Q.134, T.144, N.145, Y.156 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.134, A:N.145, A:Y.156

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Martins, T. et al., The conserved C2 phospholipid-binding domain in Delta contributes to robust Notch signalling. Embo Rep. (2021)

Release Date

2021-08-04

Peptides

Neurogenic locus protein delta: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Neurogenic locus protein delta