SMTL ID : 7all.1

A single sulfatase is required for metabolism of colonic mucin O-glycans and intestinal colonization by a symbiotic human gut bacterium (BT4683-S1_4)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.63 Å

Oligo State

monomer

Ligands

1 x NDG- GAL: beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose(Non-covalent)

NDG-GAL.1: 11 residues within 4Å: Chain A: R.72, C.73, M.94, H.133, G.162, G.163, H.219, E.335, K.355, W.505, T.506 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.72, A:G.162, A:H.219, A:E.335, A:K.355, A:K.355, A:R.72 Water bridges: A:H.133, A:D.137, A:R.72, A:E.335, A:S.356, A:Q.437

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 5 residues within 4Å: Chain A: D.35, D.36, C.73, D.329, N.330 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.35, A:D.36, A:C.73, A:D.329, A:D.329

4 x IOD: IODIDE ION(Non-functional Binders)

IOD.3: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.4: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.5: 2 residues within 4Å: Chain A: N.60, K.314 Ligand excluded by PLIP IOD.6: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Luis, A.S. et al., A single sulfatase is required to access colonic mucin by a gut bacterium. Nature (2021)

Release Date

2021-10-13

Peptides

Arylsulfatase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

Arylsulfatase