SMTL ID : 7alx.1

Sav-SOD: Chimeric Streptavidin-cSOD as Host for Artificial Metalloenzymes

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-tetramer

Ligands

4 x UFW: ((4S)-1,3-dimesityl-4-((5-((3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)pentanamido)methyl)imidazolidin-2-yl)gold(Non-covalent)

UFW.1: 25 residues within 4Å: Chain A: N.23, L.25, S.27, Y.43, S.45, V.47, G.48, A.49, W.114, A.121, S.123, T.125, W.127, W.143, L.145, S.147, T.149, N.153, A.156, S.157, L.159, D.163 Chain D: W.155, A.156, L.159 18 PLIP interactions: 15 interactions with chain A, 3 interactions with chain D Hydrophobic interactions: A:A.49, A:W.114, A:W.114, A:W.114, A:L.145, A:T.149, A:L.159, D:W.155, D:W.155, D:A.156 Hydrogen bonds: A:N.23, A:S.27, A:Y.43, A:S.45, A:A.49, A:S.123, A:S.123, A:D.163 UFW.2: 25 residues within 4Å: Chain B: N.23, L.25, S.27, Y.43, S.45, V.47, G.48, A.49, W.114, A.121, S.123, T.125, W.127, W.143, L.145, S.147, T.149, N.153, A.156, S.157, L.159, D.163 Chain C: W.155, A.156, L.159 19 PLIP interactions: 16 interactions with chain B, 3 interactions with chain C Hydrophobic interactions: B:A.49, B:W.114, B:W.114, B:W.114, B:L.145, B:T.149, B:L.159, B:L.159, C:W.155, C:W.155, C:A.156 Hydrogen bonds: B:N.23, B:S.27, B:Y.43, B:S.45, B:A.49, B:S.123, B:S.123, B:D.163 UFW.3: 25 residues within 4Å: Chain B: W.155, A.156, L.159 Chain C: N.23, L.25, S.27, Y.43, S.45, V.47, G.48, A.49, W.114, A.121, S.123, T.125, W.127, W.143, L.145, S.147, T.149, N.153, A.156, S.157, L.159, D.163 18 PLIP interactions: 15 interactions with chain C, 3 interactions with chain B Hydrophobic interactions: C:A.49, C:W.114, C:W.114, C:W.114, C:L.145, C:T.149, C:L.159, B:W.155, B:W.155, B:A.156 Hydrogen bonds: C:N.23, C:S.27, C:Y.43, C:S.45, C:A.49, C:S.123, C:S.123, C:D.163 UFW.4: 25 residues within 4Å: Chain A: W.155, A.156, L.159 Chain D: N.23, L.25, S.27, Y.43, S.45, V.47, G.48, A.49, W.114, A.121, S.123, T.125, W.127, W.143, L.145, S.147, T.149, N.153, A.156, S.157, L.159, D.163 19 PLIP interactions: 16 interactions with chain D, 3 interactions with chain A Hydrophobic interactions: D:A.49, D:W.114, D:W.114, D:W.114, D:L.145, D:T.149, D:L.159, D:L.159, A:W.155, A:W.155, A:A.156 Hydrogen bonds: D:N.23, D:S.27, D:Y.43, D:S.45, D:A.49, D:S.123, D:S.123, D:D.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Christoffel, F. et al., Design and evolution of chimeric streptavidin for protein-enabled dual gold catalysis. Nat Catal (2021)

Release Date

2021-07-14

Peptides

Streptavidin,Superoxide dismutase [Cu-Zn],Streptavidin: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

B
BBB

C
AAA

D
BBB

Streptavidin,Superoxide dismutase [Cu-Zn],Streptavidin