SMTL ID : 7am3.1

Crystal structure of Peptiligase mutant - M222P

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.61 Å

Oligo State

monomer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: G.93, Q.94, Y.95 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.95 Water bridges: A:Y.95, A:S.96, A:S.121 GOL.2: 4 residues within 4Å: Chain A: S.152, S.153, S.154, P.185 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.154 Water bridges: A:S.152, A:K.161 GOL.3: 3 residues within 4Å: Chain A: N.231, W.232, Q.236 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.231, A:Q.236 GOL.4: 5 residues within 4Å: Chain A: N.109, M.110, S.136, G.137, V.138 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.109, A:M.110, A:G.137

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.5: 3 residues within 4Å: Chain A: V.4, S.5, Y.6 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.4, A:Y.6 SO4.6: 2 residues within 4Å: Chain A: Q.176, Y.254 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.176, A:Y.254

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Toplak, A. et al., From thiol-subtilisin to omniligase: Design and structure of a broadly applicable peptide ligase. Comput Struct Biotechnol J (2021)

Release Date

2021-02-17

Peptides

Subtilisin BPN': A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Subtilisin BPN'