SMTL ID : 7am7.3 (2 other biounits)

Crystal structure of Peptiligase mutant - M222P/L217H/A225N/F189W/N218D

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.61 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: H.229, P.230, N.231, W.232 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.231, A:N.231 GOL.2: 6 residues within 4Å: Chain A: I.106, N.109, M.110, S.136, G.137, V.138 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.106, A:N.109

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.3: 4 residues within 4Å: Chain A: N.43, V.44, S.78, S.80 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:V.44

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 2 residues within 4Å: Chain A: S.123, A.124 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.124 SO4.5: 3 residues within 4Å: Chain A: Q.19, K.228, Q.266 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.228

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Toplak, A. et al., From thiol-subtilisin to omniligase: Design and structure of a broadly applicable peptide ligase. Comput Struct Biotechnol J (2021)

Release Date

2021-02-17

Peptides

Subtilisin BPN': A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Subtilisin BPN'

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