SMTL ID : 7amu.1

Crystal structure of rsEGFP2 T204A in its fluorescent on-state

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.64 Å

Oligo State

monomer

Ligands

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 2 residues within 4Å: Chain A: E.107, R.121 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.121, A:R.121, A:Q.196 Water bridges: A:T.198 GOL.2: 4 residues within 4Å: Chain A: R.121, E.123, R.134, E.136 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.121, A:R.121, A:E.136 Water bridges: A:E.123, A:R.134, A:I.135 GOL.3: 3 residues within 4Å: Chain A: Y.155, S.220, K.221 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.221 GOL.4: 3 residues within 4Å: Chain A: K.143, E.144, D.145 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.144, A:E.144, A:D.145 GOL.5: 6 residues within 4Å: Chain A: E.19, F.22, T.23, A.51, T.52, K.91 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.19, A:A.51, A:K.91 Water bridges: A:A.51 GOL.6: 5 residues within 4Å: Chain A: K.221, E.225, R.227, D.228, H.229 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.229 Water bridges: A:H.229

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.7: 5 residues within 4Å: Chain A: N.156, Y.157, S.217, K.218, L.219 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.157, A:L.219, A:L.219 SO4.8: 5 residues within 4Å: Chain A: P.27, I.28, L.29, E.46, G.47 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.28, A:G.47 SO4.9: 5 residues within 4Å: Chain A: K.119, T.120, R.121, E.136, K.138 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.119, A:R.121, A:K.138

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moreno-Chicano, T. et al., Crystal structure of rsEGFP2 in its fluorescent on-state at pH 8.0. To Be Published

Release Date

2022-04-20

Peptides

Green fluorescent protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Green fluorescent protein