- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x AHD: 4-AMINO-1-HYDROXYBUTANE-1,1-DIYLDIPHOSPHONATE(Non-covalent)
- 6 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 3 residues within 4Å:- Chain A: D.110
- Ligands: AHD.1, MG.4
4 PLIP interactions:1 interactions with chain A, 3 Ligand-Water interactions- Metal complexes: A:D.110, H2O.1, H2O.2, H2O.3
MG.3: 5 residues within 4Å:- Chain A: R.177, N.220, S.224, E.228
- Ligands: AHD.1
3 PLIP interactions:2 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:S.224, A:E.228, H2O.1
MG.4: 3 residues within 4Å:- Chain A: D.110
- Ligands: AHD.1, MG.2
5 PLIP interactions:1 interactions with chain A, 4 Ligand-Water interactions- Metal complexes: A:D.110, H2O.1, H2O.1, H2O.3, H2O.4
MG.8: 3 residues within 4Å:- Chain B: D.110
- Ligands: AHD.7, MG.10
4 PLIP interactions:1 interactions with chain B, 3 Ligand-Water interactions- Metal complexes: B:D.110, H2O.9, H2O.10, H2O.11
MG.9: 4 residues within 4Å:- Chain B: N.220, S.224, E.228
- Ligands: AHD.7
3 PLIP interactions:2 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:S.224, B:E.228, H2O.8
MG.10: 3 residues within 4Å:- Chain B: D.110
- Ligands: AHD.7, MG.8
5 PLIP interactions:1 interactions with chain B, 4 Ligand-Water interactions- Metal complexes: B:D.110, H2O.9, H2O.9, H2O.9, H2O.10
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 3 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
MPD.6: 8 residues within 4Å:- Chain A: V.80, N.103, I.181, G.182, V.183, W.186, N.285
- Ligands: AHD.1
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:I.181, A:W.186
- Hydrogen bonds: A:N.103, A:N.103
MPD.12: 7 residues within 4Å:- Chain A: R.175, V.178, R.210, T.213, R.214
- Chain B: E.171, R.175
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:R.175, B:R.175
- Water bridges: B:R.175
- Hydrophobic interactions: A:T.213
MPD.13: 8 residues within 4Å:- Chain B: V.80, N.103, I.181, G.182, W.186, L.216, N.285
- Ligands: AHD.7
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:V.80, B:L.216
- Hydrogen bonds: B:N.103, B:N.285
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Raz, K. et al., The Impression of a Nonexisting Catalytic Effect: The Role of CotB2 in Guiding the Complex Biosynthesis of Cyclooctat-9-en-7-ol. J.Am.Chem.Soc. (2020)
- Release Date
- 2020-12-02
- Peptides
- Cyclooctat-9-en-7-ol synthase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x AHD: 4-AMINO-1-HYDROXYBUTANE-1,1-DIYLDIPHOSPHONATE(Non-covalent)
- 6 x MG: MAGNESIUM ION(Non-covalent)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 3 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Raz, K. et al., The Impression of a Nonexisting Catalytic Effect: The Role of CotB2 in Guiding the Complex Biosynthesis of Cyclooctat-9-en-7-ol. J.Am.Chem.Soc. (2020)
- Release Date
- 2020-12-02
- Peptides
- Cyclooctat-9-en-7-ol synthase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B