SMTL ID : 7aps.1

The Fk1 domain of FKBP51 in complex with (2S)-2-((1S,5R,6R)-10-((3,5-dichlorophenyl)sulfonyl)-2-oxo-5-vinyl-3,10-diazabicyclo[4.3.1]decan-3-yl)propanoic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 0.94 Å

Oligo State

homo-dimer

Ligands

2 x RR5: (2~{S})-2-[(1~{S},5~{S},6~{R})-10-[3,5-bis(chloranyl)phenyl]sulfonyl-5-ethyl-2-oxidanylidene-3,10-diazabicyclo[4.3.1]decan-3-yl]propanoic acid(Non-covalent)

RR5.1: 18 residues within 4Å: Chain A: Y.45, F.55, D.56, F.65, Q.73, V.74, I.75, W.78, Y.101, S.106, K.109, I.110, F.118 Chain B: K.40, V.66, S.68, K.71, Q.73 15 PLIP interactions: 10 interactions with chain A, 5 interactions with chain B Hydrophobic interactions: A:D.56, A:F.65, A:W.78, A:W.78, A:Y.101, A:K.109 Hydrogen bonds: A:D.56, A:I.75, A:Y.101, B:S.68, B:S.68 Halogen bonds: A:S.106 Water bridges: B:K.71 Salt bridges: B:K.40, B:K.71 RR5.2: 14 residues within 4Å: Chain A: E.63 Chain B: Y.45, F.55, D.56, F.65, Q.73, V.74, I.75, W.78, Y.101, S.106, K.109, I.110, F.118 12 PLIP interactions: 11 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:Y.45, B:D.56, B:F.65, B:W.78, B:W.78, B:Y.101, B:K.109 Hydrogen bonds: B:Y.45, B:I.75, B:Y.101, B:Y.101 Water bridges: A:E.63

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kolos, J.M. et al., Picomolar FKBP inhibitors enabled by a single water-displacing methyl group in bicyclic [4.3.1] aza-amides. Chem Sci (2021)

Release Date

2021-11-03

Peptides

Peptidyl-prolyl cis-trans isomerase FKBP5: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peptidyl-prolyl cis-trans isomerase FKBP5

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