SMTL ID : 7ask.1

43S preinitiation complex from Trypanosoma cruzi with the kDDX60 helicase bound with ATP

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: K.1052, T.1053, D.1153 Ligands: ADP.2 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:T.1053

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 10 residues within 4Å: Chain A: P.1025, D.1026, S.1049, A.1050, G.1051, K.1052, T.1053, F.1054, R.1697 Ligands: MG.1 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:D.1026, A:Q.1029, A:A.1050, A:G.1051, A:K.1052, A:T.1053 Salt bridges: A:K.1052, A:R.1697

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bochler, A. et al., Structural Differences in Translation Initiation between Pathogenic Trypanosomatids and Their Mammalian Hosts. Cell Rep (2020)

Release Date

2021-04-14

Peptides

kDDX60: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

kDDX60

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