- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.51 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x GOL: GLYCEROL(Non-functional Binders)
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.2: 30 residues within 4Å:- Chain A: I.65, R.66, Y.67, A.68, L.76, I.94, I.96, K.98, W.102, F.114, H.120, T.121, G.124, L.125, Y.127, L.128, V.131, R.133, L.135, F.147, T.149, F.151, F.161, L.164, L.165, M.168, R.169, E.173, W.174, E.180
22 PLIP interactions:21 interactions with chain A, 1 Ligand-Water interactions- Hydrophobic interactions: A:I.65, A:L.76, A:L.76, A:I.94, A:F.114, A:L.128, A:L.135, A:L.135, A:F.147, A:F.147, A:F.151, A:L.164, A:W.174
- Hydrogen bonds: A:R.66, A:Y.67, A:A.68, A:W.102
- Water bridges: A:Y.67
- Salt bridges: A:K.98
- pi-Cation interactions: A:R.133
- Metal complexes: A:H.120, H2O.6
HEM.7: 30 residues within 4Å:- Chain B: I.65, R.66, Y.67, A.68, L.76, I.94, I.96, K.98, W.102, F.114, H.120, T.121, G.124, L.125, Y.127, L.128, V.131, R.133, L.135, F.147, T.149, F.151, F.161, L.164, L.165, M.168, R.169, E.173, W.174, E.180
25 PLIP interactions:24 interactions with chain B, 1 Ligand-Water interactions- Hydrophobic interactions: B:I.65, B:L.76, B:L.76, B:F.114, B:V.131, B:L.135, B:F.147, B:F.147, B:F.147, B:T.149, B:F.151, B:F.151, B:L.164, B:W.174
- Hydrogen bonds: B:R.66, B:Y.67, B:A.68, B:W.102
- Water bridges: B:Y.67, B:Y.67, B:Y.67, B:Y.67
- Salt bridges: B:K.98
- Metal complexes: B:H.120, H2O.10
- 2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
PEG.4: 5 residues within 4Å:- Chain A: R.57, L.58, G.142, E.143, E.144
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:E.144
- Water bridges: A:Q.59
PEG.9: 5 residues within 4Å:- Chain B: R.57, L.58, G.142, E.143, E.144
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:G.142, B:E.144
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Schmidt, D. et al., Arresting the Catalytic Arginine in Chlorite Dismutases: Impact on Heme Coordination, Thermal Stability, and Catalysis. Biochemistry (2021)
- Release Date
- 2021-02-17
- Peptides
- Chlorite dismutase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.51 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x GOL: GLYCEROL(Non-functional Binders)
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
- 2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Schmidt, D. et al., Arresting the Catalytic Arginine in Chlorite Dismutases: Impact on Heme Coordination, Thermal Stability, and Catalysis. Biochemistry (2021)
- Release Date
- 2021-02-17
- Peptides
- Chlorite dismutase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B