SMTL ID : 7au8.1

Structure of P. aeruginosa PBP3 in complex with a benzoxaborole (Compound 13)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.79 Å

Oligo State

monomer

Ligands

1 x S0Q: 2-(1-hydroxy-6-((2-(4-methyl-3-oxopiperazin-1-yl)-2-oxoethyl)carbamoyl)-1,3-dihydrobenzo[c][1,2]oxaborol-3-yl)acetic acid(Covalent)

S0Q.1: 16 residues within 4Å: Chain A: S.252, K.255, Y.286, V.291, S.307, N.309, Y.365, Y.367, K.442, S.443, G.444, T.445, R.447, F.491, G.492, G.493 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:V.291, A:V.291 Hydrogen bonds: A:Y.286, A:V.291, A:N.309, A:Y.367, A:K.442, A:S.443, A:T.445, A:T.445, A:G.492, A:G.493 Water bridges: A:R.289, A:T.445 Salt bridges: A:K.442

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Newman, H. et al., High-Throughput Crystallography Reveals Boron-Containing Inhibitors of a Penicillin-Binding Protein with Di- and Tricovalent Binding Modes. J.Med.Chem. (2021)

Release Date

2021-08-11

Peptides

Peptidoglycan D,D-transpeptidase FtsI: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidoglycan D,D-transpeptidase FtsI

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