SMTL ID : 7au9.1

Structure of P. aeruginosa PBP3 in complex with a benzoxaborole (Compound 14)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.14 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: Q.405, V.406, I.407, S.408 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.405

1 x S1E: N,N-dibenzyl-1-hydroxy-1,3-dihydrobenzo[c][1,2]oxaborole-6-carboxamide(Covalent)

S1E.2: 12 residues within 4Å: Chain A: S.252, K.255, V.291, S.307, N.309, Y.365, Y.367, K.442, S.443, G.444, T.445, F.491 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:V.291, A:V.291, A:Y.365, A:Y.367, A:T.445, A:F.491 Hydrogen bonds: A:V.291, A:N.309, A:K.442

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Newman, H. et al., High-Throughput Crystallography Reveals Boron-Containing Inhibitors of a Penicillin-Binding Protein with Di- and Tricovalent Binding Modes. J.Med.Chem. (2021)

Release Date

2021-08-11

Peptides

Peptidoglycan D,D-transpeptidase FtsI: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidoglycan D,D-transpeptidase FtsI

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