SMTL ID : 7avy.1

MerTK kinase domain in complex with quinazoline-based inhbitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.31 Å

Oligo State

monomer

Ligands

1 x S4E: N-(2-(2-cyclopropylethoxy)pyrimidin-5-yl)-7-methoxy-6-(piperidin-4-ylmethoxy)quinazolin-4-amine(Non-covalent)

S4E.1: 17 residues within 4Å: Chain A: L.25, G.26, V.33, A.49, K.51, I.82, L.103, P.104, F.105, M.106, D.110, T.113, M.162, A.172, D.173, F.174, L.176 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.25, A:L.176 Hydrogen bonds: A:M.106, A:D.173

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: R.83, P.104, M.106, R.164 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.83, A:R.164 SO4.3: 1 residues within 4Å: Chain A: Q.237 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.237 SO4.4: 3 residues within 4Å: Chain A: R.270, T.271, D.275 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.271, A:T.271, A:T.271, A:D.275

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nissink, J.W.M. et al., Generating Selective Leads for Mer Kinase Inhibitors-Example of a Comprehensive Lead-Generation Strategy. J.Med.Chem. (2021)

Release Date

2021-03-03

Peptides

Tyrosine-protein kinase Mer: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein kinase Mer

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