SMTL ID : 7awl.1

Structure of the thermostabilized EAAT1 cryst-II mutant in complex with barium and the allosteric inhibitor UCPH101

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.70 Å

Oligo State

homo-trimer

Ligands

3 x 6Z6: 2-Amino-5,6,7,8-tetrahydro-4-(4-methoxyphenyl)-7-(naphthalen-1-yl)-5-oxo-4H-chromene-3-carbonitrile(Non-covalent)

6Z6.1: 12 residues within 4Å: Chain A: L.108, A.113, S.116, G.117, G.120, A.123, V.124, Y.127, I.231, I.235, F.369, V.373 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.108, A:V.124, A:I.231, A:I.235, A:F.369, A:V.373 Hydrogen bonds: A:Y.127, A:F.369 6Z6.4: 12 residues within 4Å: Chain B: L.108, A.113, S.116, G.117, G.120, A.123, V.124, Y.127, I.231, I.235, F.369, V.373 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:L.108, B:V.124, B:I.231, B:I.235, B:F.369, B:V.373 Hydrogen bonds: B:Y.127, B:F.369 6Z6.7: 12 residues within 4Å: Chain C: L.108, A.113, S.116, G.117, G.120, A.123, V.124, Y.127, I.231, I.235, F.369, V.373 8 PLIP interactions: 8 interactions with chain C Hydrophobic interactions: C:L.108, C:V.124, C:I.231, C:I.235, C:F.369, C:V.373 Hydrogen bonds: C:Y.127, C:F.369

6 x BA: BARIUM ION(Non-covalent)

BA.2: 1 residues within 4Å: Chain A: Q.245 No protein-ligand interaction detected (PLIP) BA.3: 6 residues within 4Å: Chain A: Y.127, T.130, T.131, N.378, M.379, D.380 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:Y.127, A:T.131, A:D.380 BA.5: 1 residues within 4Å: Chain B: Q.245 No protein-ligand interaction detected (PLIP) BA.6: 6 residues within 4Å: Chain B: Y.127, T.130, T.131, N.378, M.379, D.380 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:Y.127, B:T.131, B:D.380 BA.8: 1 residues within 4Å: Chain C: Q.245 No protein-ligand interaction detected (PLIP) BA.9: 6 residues within 4Å: Chain C: Y.127, T.130, T.131, N.378, M.379, D.380 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:Y.127, C:T.131, C:D.380

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Canul-Tec, J.C. et al., The ion-coupling mechanism of human excitatory amino acid transporters. Embo J. (2022)

Release Date

2021-10-13

Peptides

Excitatory amino acid transporter 1, Neutral amino acid transporter, Excitatory amino acid transporter, Transporter protein: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Excitatory amino acid transporter 1, Neutral amino acid transporter, Excitatory amino acid transporter, Transporter protein

Related Entries With Identical Sequence