SMTL ID : 7axa.2 (1 other biounit)

Crystal structure of the hPXR-LBD in complex with clotrimazole

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.26 Å

Oligo State

homo-dimer

Ligands

2 x CL6: 1-[(2-CHLOROPHENYL)(DIPHENYL)METHYL]-1H-IMIDAZOLE(Non-covalent)

CL6.1: 13 residues within 4Å: Chain A: S.90, L.91, V.93, M.125, S.129, Q.167, F.170, W.181, Y.188, L.190, M.205, L.206, H.209 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.91, A:V.93, A:F.170, A:F.170, A:W.181, A:W.181, A:Y.188, A:L.190, A:L.206 Hydrogen bonds: A:Q.167 pi-Stacking: A:W.181, A:Y.188, A:H.289 CL6.2: 13 residues within 4Å: Chain B: S.90, L.91, V.93, M.125, S.129, Q.167, F.170, W.181, Y.188, L.190, M.205, L.206, H.209 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:L.91, B:V.93, B:F.170, B:F.170, B:W.181, B:W.181, B:Y.188, B:L.190, B:L.206 Hydrogen bonds: B:Q.167 pi-Stacking: B:W.181, B:Y.188, B:H.289

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Delfosse, V. et al., Mechanistic insights into the synergistic activation of the RXR-PXR heterodimer by endocrine disruptor mixtures. Proc.Natl.Acad.Sci.USA (2021)

Release Date

2021-01-13

Peptides

Nuclear receptor subfamily 1 group I member 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Nuclear receptor subfamily 1 group I member 2

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