SMTL ID : 7aym.1

Structure of DDR2 Kinase domain in complex with IBZ3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.12 Å

Oligo State

monomer

Ligands

1 x 4VD: N-[5-({[(3-fluorophenyl)carbamoyl]amino}methyl)-2-methylphenyl]imidazo[1,2-a]pyridine-3-carboxamide(Non-covalent)

4VD.1: 23 residues within 4Å: Chain A: L.40, V.48, A.77, V.78, K.79, E.96, I.99, M.100, I.109, M.123, T.125, E.126, Y.127, M.128, G.131, L.181, H.188, L.197, I.206, A.207, D.208, F.209, R.213 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.40, A:A.77, A:K.79, A:K.79, A:T.125, A:Y.127, A:L.197, A:D.208 Hydrogen bonds: A:E.96, A:T.125, A:M.128, A:D.208

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nawrotek, A. et al., Structure of DDR2 Kinase domain in complex with IBZ3. To Be Published

Release Date

2020-12-16

Peptides

Discoidin domain-containing receptor 2,Epithelial discoidin domain-containing receptor 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Discoidin domain-containing receptor 2,Epithelial discoidin domain-containing receptor 1