SMTL ID : 7b3z.1

Crystal structure of c-MET bound by compound 5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 5 residues within 4Å: Chain A: Y.237, P.238, D.239, V.240, Y.248 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.239, A:V.240 Salt bridges: A:D.239

1 x SV8: 3-[3-(phenylmethyl)-1~{H}-pyrrolo[2,3-b]pyridin-5-yl]-4,5-dihydro-1~{H}-pyrrolo[3,4-b]pyrrol-6-one(Non-covalent)

SV8.2: 14 residues within 4Å: Chain A: I.37, F.42, V.45, A.61, K.63, L.110, P.111, Y.112, M.113, K.114, G.116, M.164, A.179, M.182 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.37, A:F.42, A:V.45, A:K.63, A:L.110 Hydrogen bonds: A:P.111, A:Y.112, A:M.113

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Collie, G.W. et al., Structural Basis for Targeting the Folded P-Loop Conformation of c-MET. Acs Med.Chem.Lett. (2021)

Release Date

2020-12-09

Peptides

Hepatocyte growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Hepatocyte growth factor receptor

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