SMTL ID : 7b5v.1

The carbohydrate binding module family 48 (CBM48) and carboxy-terminal carbohydrate esterase family 1 (CE1) domains of the multidomain esterase DmCE1B from Dysgonomonas mossii

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: G.180, S.272, M.273 Ligand excluded by PLIP

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 5 residues within 4Å: Chain A: G.36, A.37, Q.38, Y.39, A.105 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.38, A:Y.39

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 4 residues within 4Å: Chain A: D.56 Chain B: R.59, D.97, G.98 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:K.58, B:K.58, B:R.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kmezik, C. et al., A polysaccharide utilization locus from the gut bacterium Dysgonomonas mossii encodes functionally distinct carbohydrate esterases. J.Biol.Chem. (2021)

Release Date

2021-03-10

Peptides

Carbohydrate Esterase family 1 protein with an N-terminal carbohydrate binding module family 48: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Carbohydrate Esterase family 1 protein with an N-terminal carbohydrate binding module family 48

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