SMTL ID : 7b6f.1

GSK3-beta in complex with compound (S)-5c

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x SZW: 3-[(3~{S})-3-[(7-chloranyl-9~{H}-pyrimido[4,5-b]indol-4-yl)-methyl-amino]piperidin-1-yl]propanenitrile(Non-covalent)

SZW.1: 16 residues within 4Å: Chain A: I.37, F.42, V.45, A.58, K.60, V.85, L.107, D.108, Y.109, V.110, T.113, Q.160, N.161, L.163, C.174, D.175 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.42, A:F.42, A:V.45, A:V.85, A:L.107, A:L.163, A:D.175 Hydrogen bonds: A:D.108, A:V.110

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: Y.31, Y.46, K.61, N.104 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.93, A:S.93 Water bridges: A:Y.31 EDO.3: 3 residues within 4Å: Chain A: S.194, R.195, Y.196 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.195 Water bridges: A:S.194

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 5 residues within 4Å: Chain A: R.71, R.155, K.180, N.188, V.189 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:V.189 Water bridges: A:R.155 Salt bridges: A:R.71, A:R.155, A:K.180 SO4.5: 3 residues within 4Å: Chain A: R.281, P.282, R.283 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.283 Salt bridges: A:R.281

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tesch, R. et al., GSK3-beta in complex with compound (S)-5c. To be published

Release Date

2020-12-16

Peptides

Glycogen synthase kinase-3 beta: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glycogen synthase kinase-3 beta

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