SMTL ID : 7b9z.1

Structure of the FKBP51FK1 domain in complex with the macrocyclic SAFit analogue 35-(E)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.44 Å

Oligo State

monomer

Ligands

1 x T58: 2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-25,26-dimethoxy-11,18,23-trioxa-4-azatetracyclo[22.3.1.113,17.04,9]nonacosa-1(27),13(29),14,16,20,24(28),25-heptaene-3,10-dione(Non-covalent)

T58.1: 20 residues within 4Å: Chain A: Y.47, G.49, K.50, L.51, K.56, F.57, D.58, R.63, F.67, G.74, Q.75, V.76, I.77, W.80, Y.103, S.108, K.111, I.112, L.118, F.120 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.47, A:K.56, A:D.58, A:F.67, A:F.67, A:W.80, A:W.80, A:Y.103, A:I.112 Hydrogen bonds: A:I.77 Water bridges: A:K.111

3 x IS8: isothiocyanate(Non-covalent)

IS8.2: 7 residues within 4Å: Chain A: L.51, S.52, N.53, P.113, N.115, A.116, T.117 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.117 Water bridges: A:N.115, A:T.117 IS8.3: 3 residues within 4Å: Chain A: G.104, S.105, A.106 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.105 Water bridges: A:Y.103, A:A.106 IS8.4: 4 residues within 4Å: Chain A: V.27, K.28, R.29, V.30 2 PLIP interactions: 2 interactions with chain A Water bridges: A:V.27, A:V.27

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bauder, M. et al., Structure-Based Design of High-Affinity Macrocyclic FKBP51 Inhibitors. J.Med.Chem. (2021)

Release Date

2021-03-17

Peptides

Peptidyl-prolyl cis-trans isomerase FKBP5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl-prolyl cis-trans isomerase FKBP5

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