SMTL ID : 7bai.2 (1 other biounit)

Structure of RIG-I CTD (I875A) bound to p-RNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.40 Å

Oligo State

homo-dimer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 7 residues within 4Å: Chain A: C.12, C.66, C.71, H.73, W.75 Ligands: ZN.2, ZN.6 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:C.12, A:C.71 ZN.2: 6 residues within 4Å: Chain A: C.12, C.15, C.66, C.71 Ligands: ZN.1, ZN.6 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.12, A:C.15, A:C.71 ZN.3: 7 residues within 4Å: Chain C: C.66, R.68, C.71, S.72, H.73 Ligands: ZN.4, ZN.5 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:C.66, C:C.71 ZN.4: 7 residues within 4Å: Chain C: C.12, C.66, C.71, H.73, W.75 Ligands: ZN.3, ZN.5 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:C.12, C:C.71 ZN.5: 6 residues within 4Å: Chain C: C.12, C.15, C.66, C.71 Ligands: ZN.3, ZN.4 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:C.12, C:C.15, C:C.71 ZN.6: 7 residues within 4Å: Chain A: C.66, R.68, C.71, S.72, H.73 Ligands: ZN.1, ZN.2 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:C.66, A:C.71

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

de Regt, A.K. et al., A conserved isoleucine in the RNA sensor RIG-I controls immune tolerance to mitochondrial RNA. To Be Published

Release Date

2022-01-12

Peptides

Antiviral innate immune response receptor RIG-I: AC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

C
E

Antiviral innate immune response receptor RIG-I

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