SMTL ID : 7ben.1 (1 other biounit)

Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in a ternary complex with COVOX-253 and COVOX-75 Fabs

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.50 Å
Oligo State
hetero-1-1-1-1-1-mer
Ligands
1 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
2 x IMD: IMIDAZOLE(Non-covalent)
4 x GOL: GLYCEROL(Non-functional Binders)
6 x BR: BROMIDE ION(Non-covalent)
1 x PG6: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Dejnirattisai, W. et al., The antigenic anatomy of SARS-CoV-2 receptor binding domain. Cell (2021)
Release Date
2021-03-03
Peptides
Spike glycoprotein: A
COVOX-253 heavy chain: B
COVOX-253 light chain: C
COVOX-75 heavy chain: D
COVOX-75 light chain: E
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
E
B
H
C
L
D
A
E
B

Spike glycoprotein

COVOX-253 heavy chain

COVOX-253 light chain

COVOX-75 heavy chain

COVOX-75 light chain

Related Entries With Identical Sequence

6zcz.1 | 7beh.1 | 7bei.1 | 7bej.1 | 7bek.1 | 7bel.1 | 7bel.2 | 7bem.1 | 7ben.2 | 7beo.1 | 7beo.2 | 7bep.1 | 7bep.2 | 7neh.1 | 7nx6.1 | 7or9.1 | 7ora.1 | 7ora.2 | 7orb.1 | 7orb.2 | 7pqy.1 | 7pqy.2 | 7pqz.1 | 7pr0.1 | 7pr0.2 | 7pr0.3