SMTL ID : 7bgu.2 (1 other biounit)

Mason-Pfizer Monkey Virus Protease mutant C7A/D26N/C106A in complex with peptidomimetic inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.43 Å

Oligo State

homo-dimer

Ligands

1 x PRO- 0A1- VAL- PSA- ALA- MET- THR: peptidomimetic inhibitor(Non-covalent)

PRO-0A1-VAL-PSA-ALA-MET-THR.1: 24 residues within 4Å: Chain A: K.9, L.24, N.26, G.28, A.29, I.33, L.52, R.53, P.89, L.92 Chain B: K.9, N.26, G.28, A.29, D.30, V.31, I.33, T.50, N.51, L.52, R.53, G.54, I.55, L.92 21 PLIP interactions: 15 interactions with chain B, 6 interactions with chain A Hydrophobic interactions: B:A.29, B:V.31, B:I.33, B:L.52, B:R.53, B:L.92, A:L.24, A:L.92 Hydrogen bonds: B:N.26, B:G.28, B:G.28, B:D.30, B:D.30, B:D.30, B:R.53, B:R.53, A:N.26, A:G.28 Water bridges: B:K.9, A:D.30 Salt bridges: A:R.53

1 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)

1PE.2: 5 residues within 4Å: Chain B: W.15, D.17, D.18, R.71, N.75 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.75

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wosicki, S. et al., Crystal structures of inhibitor complexes of M-PMV protease with visible flap loops. Protein Sci. (2021)

Release Date

2021-12-15

Peptides

Gag-Pro-Pol polyprotein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Gag-Pro-Pol polyprotein

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