SMTL ID : 7bji.1 (1 other biounit)

Crystal structure of the Danio rerio centrosomal protein Cep135 coiled-coil fragment 64-190

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.58 Å

Oligo State

homo-dimer

Ligands

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 5 residues within 4Å: Chain A: N.23, N.24, H.27 Chain B: E.22, M.26 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:H.27 Hydrogen bonds: A:N.23 Water bridges: A:N.23, A:N.24 ACT.7: 3 residues within 4Å: Chain B: E.15, L.19, E.22 1 PLIP interactions: 1 interactions with chain A Water bridges: A:N.23

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.2: 1 residues within 4Å: Chain A: Y.12 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.12

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 1 residues within 4Å: Chain A: Y.12 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.12 EDO.4: 4 residues within 4Å: Chain A: Y.12, K.13, N.16 Chain B: Y.12 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.16 EDO.6: 4 residues within 4Å: Chain A: E.15, L.19 Chain B: V.20 Ligands: GOL.5 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.15

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 5 residues within 4Å: Chain A: E.15, R.18, E.22 Chain B: N.23 Ligands: EDO.6 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Q. et al., Crystal structure of the Danio rerio centrosomal protein Cep135 coiled-coil fragment 64-190. To Be Published

Release Date

2021-01-27

Peptides

Centrosomal protein of 135 kDa: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Centrosomal protein of 135 kDa

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