SMTL ID : 7bmm.1 (1 other biounit)

Crystal structure of Polyphosphate Kinase 2 from Deinococcus radiodurans in apo form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.06 Å

Oligo State

homo-dimer

Ligands

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 7 residues within 4Å: Chain A: A.67, A.68, G.69, K.70, D.71, G.72, R.182 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:A.67, A:A.68, A:G.69, A:K.70, A:D.71, A:R.182, A:R.182 Water bridges: A:G.72 Salt bridges: A:K.70 PO4.2: 4 residues within 4Å: Chain A: R.182, K.188, K.191, K.231 9 PLIP interactions: 9 interactions with chain A Water bridges: A:R.182, A:R.182, A:R.182, A:K.231, A:K.231 Salt bridges: A:R.182, A:K.188, A:K.191, A:K.231 PO4.3: 9 residues within 4Å: Chain B: R.65, D.66, A.67, A.68, G.69, K.70, D.71, G.72, R.182 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:A.67, B:A.68, B:G.69, B:K.70, B:D.71 Salt bridges: B:K.70, B:R.182

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Silva, S.T.N. et al., Crystal structure of Polyphosphate Kinase 2 from Deinococcus radiodurans in apo form. To Be Published

Release Date

2021-04-07

Peptides

PPK2 domain-containing protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

PPK2 domain-containing protein

Related Entries With Identical Sequence