SMTL ID : 7bop.6 (5 other biounits)

Crystal Structure of Core-mannan synthase A (CmsA/Ktr4) from Aspergillus fumigatus, Mn/GDP-form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 3 residues within 4Å: Chain A: E.194, H.343 Ligands: GDP.2 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.194, A:H.343, H2O.2, H2O.3

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.2: 15 residues within 4Å: Chain A: L.74, V.75, R.76, E.79, N.106, D.107, W.136, Y.161, S.166, Y.167, M.170, E.194, P.195, H.343 Ligands: MN.1 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:V.75, A:R.76, A:E.79, A:F.105, A:D.107, A:E.194 Water bridges: A:L.74, A:R.76, A:R.76, A:R.76, A:R.76, A:N.106, A:D.107, A:S.166 Salt bridges: A:R.76, A:D.107, A:H.343 pi-Cation interactions: A:R.76

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: L.224, F.225, D.226, H.278, W.280 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.226, A:H.278 Water bridges: A:R.313, A:R.313 GOL.4: 4 residues within 4Å: Chain A: Y.127, E.129, A.183, Y.187 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.129, A:Y.187 Water bridges: A:P.182, A:N.186

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hira, D. et al., Structural basis for the core-mannan biosynthesis of cell wall fungal-type galactomannan in Aspergillus fumigatus . J.Biol.Chem. (2020)

Release Date

2020-09-09

Peptides

Alpha-1,2-mannosyltransferase (Ktr4), putative: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

Alpha-1,2-mannosyltransferase (Ktr4), putative

Related Entries With Identical Sequence