SMTL ID : 7bps.1 (1 other biounit)

Crystal structure of mouse TEX101

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

1 x NAG- FUC: alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-FUC.1: 5 residues within 4Å: Chain A: N.24, T.26, S.27, K.28, D.97 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:K.28 Hydrogen bonds: A:D.97

1 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-FUC.2: 4 residues within 4Å: Chain A: L.37, G.64, E.66, N.89 No protein-ligand interaction detected (PLIP)

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: N.95, K.96, D.97, S.98 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.97, A:S.98, A:S.98 Salt bridges: A:K.96 SO4.4: 2 residues within 4Å: Chain A: R.118, H.119 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.119 Salt bridges: A:R.118, A:H.119

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Masutani, M. et al., Crystal structure of TEX101, a glycoprotein essential for male fertility, reveals the presence of tandemly arranged Ly6/uPAR domains. Febs Lett. (2020)

Release Date

2020-07-15

Peptides

Testis-expressed protein 101: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Testis-expressed protein 101

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