SMTL ID : 7bra.1

Bacillus subtilis IRG1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.79 Å

Oligo State

homo-dimer

Ligands

2 x CXS: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID(Non-covalent)

CXS.1: 9 residues within 4Å: Chain A: I.265, Y.266, R.280, G.335, L.336, T.337, D.409, E.412, K.413 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:D.409, A:K.413 Hydrogen bonds: A:L.336 Water bridges: A:R.280, A:H.334 Salt bridges: A:R.280 CXS.3: 8 residues within 4Å: Chain B: I.265, R.280, G.335, L.336, T.337, D.409, E.412, K.413 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:D.409, B:K.413 Hydrogen bonds: B:L.336 Water bridges: B:R.280, B:R.280 Salt bridges: B:R.280

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: G.333, H.334, G.335, H.340 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.333, A:G.335 Water bridges: A:H.334, A:H.340 Salt bridges: A:H.334, A:H.340 SO4.4: 5 residues within 4Å: Chain B: G.333, H.334, G.335, E.339, H.340 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.335 Water bridges: B:G.333, B:H.334 Salt bridges: B:H.334, B:H.340

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chun, H.L. et al., Enzymatic reaction mechanism of cis-aconitate decarboxylase based on the crystal structure of IRG1 from Bacillus subtilis. Sci Rep (2020)

Release Date

2021-02-03

Peptides

Bacillus subtilis IRG1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Bacillus subtilis IRG1